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STRINGSTRING
PP1S20_122V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S20_122V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S20_122V6.1Predicted protein (397 aa)    
Predicted Functional Partners:
PP1S74_54V6.1
Predicted protein (565 aa)
     
 
  0.995
PP1S641_1V6.1
Predicted protein (807 aa)
     
 
  0.989
PP1S20_272V6.1
Predicted protein (198 aa)
     
 
  0.981
PP1S70_254V6.1
annotation not available (457 aa)
     
 
  0.973
PP1S215_103V6.1
Predicted protein (88 aa)
     
 
  0.965
PP1S73_18V6.1
Predicted protein (742 aa)
     
 
  0.964
PP1S114_84V6.1
Predicted protein (335 aa)
     
 
  0.959
PP1S98_7V6.1
annotation not available (617 aa)
     
 
  0.956
PP1S505_13V6.1
Predicted protein (616 aa)
     
 
  0.956
PP1S43_55V6.2
Predicted protein (1046 aa)
     
 
  0.955
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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