• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S20_161V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S20_161V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S20_161V6.1annotation not available (654 aa)    
Predicted Functional Partners:
PP1S64_180V6.4
Predicted protein (596 aa)
     
   
  0.637
PP1S487_3V6.1
annotation not available (643 aa)
     
   
  0.637
PP1S15_379V6.3
Predicted protein (275 aa)
     
   
  0.637
PP1S41_201V6.1
annotation not available (707 aa)
           
  0.538
PP1S295_45V6.1
Predicted protein (2090 aa)
     
   
  0.518
PP1S386_25V6.1
Predicted protein (882 aa)
           
  0.513
PP1S268_39V6.1
Predicted protein (1072 aa)
           
  0.513
PP1S156_14V6.1
annotation not available (1141 aa)
           
  0.513
PP1S36_347V6.1
annotation not available (769 aa)
     
   
  0.506
PP1S54_134V6.1
annotation not available (544 aa)
           
  0.469
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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