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STRINGSTRING
PP1S20_284V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S20_284V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S20_284V6.1Predicted protein (522 aa)    
Predicted Functional Partners:
PP1S5_30V6.1
Predicted protein (394 aa)
 
 
  0.991
PP1S372_25V6.1
Predicted protein (358 aa)
 
   
  0.979
PP1S3_343V6.1
Predicted protein; Belongs to the FPP/GGPP synthase family (387 aa)
   
  0.977
PP1S167_155V6.1
Predicted protein; Belongs to the FPP/GGPP synthase family (387 aa)
   
  0.977
PP1S97_248V6.1
Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplast (360 aa)
   
 
  0.974
PP1S239_18V6.1
Predicted protein (423 aa)
   
 
  0.974
PP1S116_45V6.1
annotation not available (117 aa)
 
   
  0.969
PP1S22_8V6.1
annotation not available (95 aa)
   
 
  0.969
CHLH2
CHLH2 like Mg protoporphyrin IX chelatase subunit H protein (1420 aa)
 
   
  0.968
CHLH1
CHLH2 like Mg protoporphyrin IX chelatase subunit H protein (1420 aa)
 
   
  0.968
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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