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PP1S20_305V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S20_305V6.1" - Phenylalanine ammonia-lyase in Physcomitrella patens
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S20_305V6.1Phenylalanine ammonia-lyase (739 aa)    
Predicted Functional Partners:
PP1S298_4V6.1
Cinnamate 4-hydroxylase (517 aa)
     
 
  0.950
PP1S168_84V6.1
Predicted protein (542 aa)
     
 
  0.950
PP1S71_170V6.1
4-coumarate-coenzyme A ligase 3 (576 aa)
   
 
  0.950
PP1S20_346V6.1
4-coumarate-coenzyme A ligase 2 (669 aa)
   
 
  0.950
PP1S185_66V6.1
4-coumarate-coenzyme A ligase 1 (585 aa)
   
 
  0.950
PP1S167_96V6.1
4-coumarate-coenzyme A ligase 4 (600 aa)
   
 
  0.950
PP1S96_224V6.1
Predicted protein (578 aa)
       
  0.946
PP1S6_265V6.1
Predicted protein (552 aa)
       
  0.946
PP1S52_101V6.1
Predicted protein (552 aa)
       
  0.946
PP1S356_35V6.1
Annotation not available (508 aa)
       
  0.946
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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