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PP1S20_305V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S20_305V6.1" - Phenylalanine ammonia-lyase in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S20_305V6.1Phenylalanine ammonia-lyase (739 aa)    
Predicted Functional Partners:
PP1S84_76V6.1
Arogenate dehydratase; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine (424 aa)
     
 
  0.845
PP1S68_169V6.1
Arogenate dehydratase; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine (434 aa)
     
 
  0.845
PP1S20_358V6.1
Arogenate dehydratase; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine (427 aa)
     
 
  0.845
PP1S17_86V6.1
Arogenate dehydratase; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine (428 aa)
     
 
  0.845
PP1S96_224V6.1
Predicted protein (578 aa)
       
  0.816
PP1S325_20V6.1
Predicted protein (578 aa)
       
  0.816
PP1S356_35V6.1
Predicted protein (508 aa)
       
  0.763
PP1S175_129V6.1
Predicted protein (423 aa)
       
  0.752
PP1S71_170V6.1
Predicted protein; 4-coumarate-coenzyme A ligase 3 (576 aa)
   
 
  0.747
PP1S20_346V6.1
Predicted protein; 4-coumarate-coenzyme A ligase 2 (669 aa)
   
 
  0.747
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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