STRINGSTRING
PP1S20_50V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S20_50V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S20_50V6.1Predicted protein (2209 aa)    
Predicted Functional Partners:
cesA4
Cellulose synthase 4, glycosyltransferase family 2 (1099 aa)
     
 
  0.542
PP1S29_241V6.1
Predicted protein (1096 aa)
     
 
  0.542
cesA5
Cellulose synthase 5, glycosyltransferase family 2 (1081 aa)
     
 
  0.523
cesA3
Cellulose synthase 8, glycosyltransferase family 2 (1092 aa)
     
 
  0.523
PP1S212_83V6.1
Annotation not available (1519 aa)
     
   
  0.449
PP1S16_248V6.1
Annotation not available (1515 aa)
     
   
  0.449
PP1S35_333V6.1
Predicted protein (610 aa)
     
   
  0.431
PP1S190_6V6.1
Predicted protein (608 aa)
     
   
  0.431
PP1S157_35V6.1
Predicted protein (610 aa)
     
   
  0.431
PP1S64_166V6.1
Predicted protein; Lipolytic acyl hydrolase (LAH) (434 aa)
           
  0.407
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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