STRINGSTRING
PP1S20_72V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S20_72V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S20_72V6.1Predicted protein (54 aa)    
Predicted Functional Partners:
PP1S67_251V6.1
Predicted protein (451 aa)
       
 
  0.651
PP1S268_65V6.1
Predicted protein (422 aa)
       
 
  0.651
PP1S205_47V6.1
Annotation not available (1199 aa)
       
 
  0.651
PP1S148_98V6.1
Annotation not available (1205 aa)
       
 
  0.651
PP1S22_40V6.1
Predicted protein (757 aa)
           
  0.467
PP1S2_147V6.1
Predicted protein (525 aa)
           
  0.446
PP1S92_14V6.1
Predicted protein; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium (1074 aa)
     
      0.436
PCA1
Predicted protein; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium (1098 aa)
     
      0.436
PP1S37_351V6.1
Predicted protein; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium (1046 aa)
     
      0.436
PP1S34_48V6.1
Predicted protein (1158 aa)
     
      0.436
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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