STRINGSTRING
PP1S211_20V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S211_20V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S211_20V6.1Predicted protein (579 aa)    
Predicted Functional Partners:
PP1S104_141V6.1
Predicted protein (821 aa)
   
  0.975
PP1S13_205V6.1
Predicted protein (501 aa)
   
  0.975
PP1S34_164V6.1
Predicted protein (153 aa)
   
 
  0.955
PP1S46_194V6.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (263 aa)
   
 
  0.925
PP1S227_112V6.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (224 aa)
   
 
  0.925
PP1S97_156V6.1
Predicted protein (152 aa)
     
      0.920
PP1S455_6V6.1
Predicted protein (772 aa)
     
      0.920
PP1S16_272V6.1
Annotation not available (825 aa)
     
      0.920
PP1S54_48V6.2
Predicted protein (522 aa)
   
 
  0.875
PP1S304_37V6.1
Predicted protein (698 aa)
   
 
  0.838
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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