• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S211_83V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S211_83V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S211_83V6.1annotation not available (257 aa)    
Predicted Functional Partners:
PP1S133_44V6.1
Predicted protein (198 aa)
     
        0.566
PP1S42_259V6.2
annotation not available (585 aa)
           
  0.548
PP1S301_54V6.1
Predicted protein (589 aa)
           
  0.548
PP1S167_52V6.2
annotation not available (592 aa)
           
  0.548
PP1S102_20V6.1
Predicted protein (383 aa)
           
  0.543
PP1S150_16V6.1
Predicted protein (763 aa)
       
 
  0.538
PP1S9_149V6.1
annotation not available (355 aa)
           
  0.538
PP1S253_43V6.1
annotation not available (279 aa)
     
   
  0.526
PP1S239_60V6.1
Predicted protein (895 aa)
     
   
  0.526
PP1S14_122V6.1
annotation not available (615 aa)
     
   
  0.526
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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