STRINGSTRING
PP1S212_59V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S212_59V6.2" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S212_59V6.2Predicted protein (411 aa)    
Predicted Functional Partners:
PP1S20_135V6.1
Predicted protein (719 aa)
   
 
  0.983
PP1S387_50V6.1
Predicted protein (580 aa)
   
  0.977
PP1S5_53V6.1
Predicted protein (479 aa)
       
  0.966
PP1S523_22V6.1
Predicted protein (489 aa)
       
  0.966
PP1S302_63V6.1
Predicted protein; Catalyzes the oxidation of L-aspartate to iminoaspartate (684 aa)
   
  0.951
PP1S1_401V6.1
Predicted protein (388 aa)
   
 
  0.905
PP1S71_354V6.1
Predicted protein (725 aa)
         
  0.902
PP1S85_84V6.1
Predicted protein (360 aa)
       
    0.901
PP1S425_16V6.2
Predicted protein (368 aa)
       
    0.901
PP1S66_124V6.1
Predicted protein (583 aa)
         
  0.901
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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