STRINGSTRING
PP1S212_83V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S212_83V6.1" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S212_83V6.1Annotation not available (1519 aa)    
Predicted Functional Partners:
PP1S9_216V6.1
Annotation not available (306 aa)
       
  0.914
PP1S9_154V6.1
Annotation not available (330 aa)
       
  0.914
PP1S49_127V6.1
Annotation not available (271 aa)
       
  0.914
PP1S49_111V6.1
Annotation not available (271 aa)
       
  0.914
PP1S12_286V6.1
Predicted protein (282 aa)
       
      0.895
PP1S66_170V6.1
Predicted protein (2006 aa)
     
 
  0.815
PP1S131_18V6.1
Annotation not available (2002 aa)
     
 
  0.815
PP1S115_80V6.1
Predicted protein (377 aa)
       
 
  0.814
PP1S130_12V6.1
Annotation not available (524 aa)
     
 
  0.811
PP1S266_15V6.1
Tubulin gamma chain ; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome (475 aa)
     
  0.769
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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