STRINGSTRING
PP1S212_86V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S212_86V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S212_86V6.1Predicted protein (160 aa)    
Predicted Functional Partners:
PP1S61_57V6.1
Predicted protein (106 aa)
     
  0.996
PP1S317_15V6.1
Predicted protein (111 aa)
     
  0.996
PP1S54_122V6.1
Predicted protein (632 aa)
     
  0.988
PP1S197_66V6.1
Predicted protein (652 aa)
     
  0.988
PP1S27_330V6.1
Predicted protein (324 aa)
     
  0.986
PP1S94_39V6.1
Predicted protein (931 aa)
     
  0.985
PP1S62_62V6.1
Annotation not available (979 aa)
     
  0.985
PP1S16_412V6.1
Annotation not available (848 aa)
     
  0.985
PP1S10_326V6.1
Predicted protein (808 aa)
     
  0.985
PP1S46_194V6.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (263 aa)
     
  0.984
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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