STRINGSTRING
PP1S214_85V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S214_85V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S214_85V6.1Predicted protein (1090 aa)    
Predicted Functional Partners:
ALDH7A
Antiquitin (511 aa)
   
 
  0.962
PP1S73_93V6.1
Predicted protein (515 aa)
       
  0.945
PP1S405_31V6.1
Predicted protein (515 aa)
       
  0.945
PP1S42_130V6.1
Annotation not available (550 aa)
     
      0.876
PP1S138_126V6.1
Annotation not available (550 aa)
     
      0.876
PP1S651_4V6.1
Annotation not available (215 aa)
       
      0.653
PP1S42_178V6.1
Predicted protein (347 aa)
       
      0.653
PP1S31_308V6.1
Predicted protein (326 aa)
       
      0.653
PP1S58_120V6.1
Predicted protein (122 aa)
       
 
  0.644
PP1S58_147V6.1
Annotation not available (1356 aa)
   
   
  0.624
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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