STRINGSTRING
PP1S215_109V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S215_109V6.2" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S215_109V6.2Predicted protein (378 aa)    
Predicted Functional Partners:
Pa
Predicted protein (118 aa)
     
   
  0.510
Pb
Predicted protein (119 aa)
     
   
  0.510
PSBS
Photosystem II 22kDa chloroplast protein (280 aa)
     
   
  0.477
Sep4b
Predicted protein (385 aa)
           
  0.472
Sep4c
Predicted protein (304 aa)
           
  0.472
Sep4a
Predicted protein (304 aa)
           
  0.472
PP1S50_125V6.1
SBP-domain protein 6 (695 aa)
           
  0.407
PP1S194_57V6.1
Predicted protein (699 aa)
           
  0.407
PP1S194_53V6.1
Squamosa promoter binding protein 3 (661 aa)
           
  0.407
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
Server load: low (21%) [HD]