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STRINGSTRING
PP1S217_30V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S217_30V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S217_30V6.1Predicted protein; Belongs to the AAA ATPase family (813 aa)    
Predicted Functional Partners:
PP1S60_307V6.1
Predicted protein (347 aa)
     
  0.986
PP1S90_180V6.1
Predicted protein (437 aa)
     
  0.963
PP1S199_103V6.1
Predicted protein (430 aa)
     
  0.963
PP1S224_38V6.1
Predicted protein (991 aa)
   
 
  0.933
PP1S1_402V6.1
annotation not available (744 aa)
     
 
  0.929
PP1S245_32V6.2
Predicted protein (322 aa)
     
 
  0.929
PP1S37_31V6.1
Predicted protein (768 aa)
     
 
  0.923
PP1S34_215V6.2
Predicted protein (467 aa)
     
 
  0.922
PP1S130_285V6.1
Predicted protein (241 aa)
     
 
  0.919
PP1S358_11V6.1
Predicted protein (409 aa)
     
 
  0.918
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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