STRINGSTRING
PP1S219_3V6.3 protein (Physcomitrella patens) - STRING interaction network
"PP1S219_3V6.3" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S219_3V6.3Predicted protein (314 aa)    
Predicted Functional Partners:
PP1S114_137V6.1
Predicted protein (699 aa)
     
      0.667
cpk1
Calcium-dependent protein kinase (549 aa)
     
  0.578
PP1S325_31V6.1
Predicted protein (534 aa)
     
  0.578
PP1S316_13V6.1
Calcium-dependent protein kinase (545 aa)
     
  0.578
PP1S143_92V6.1
Calcium-dependent protein kinase (628 aa)
     
  0.578
PP1S108_32V6.1
Calcium-dependent protein kinase (578 aa)
     
  0.578
PP1S108_25V6.1
Predicted protein (567 aa)
     
  0.578
cpk12
Cpk12 calcium-dependent protein kinasePredicted protein (491 aa)
     
  0.570
PP1S49_200V6.1
Cpk12 calcium-dependent protein kinasePredicted protein (491 aa)
     
  0.570
cpk9
Calcium-dependent protein kinase (575 aa)
     
  0.570
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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