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STRINGSTRING
PP1S219_54V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S219_54V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S219_54V6.1annotation not available (539 aa)    
Predicted Functional Partners:
PP1S150_109V6.1
annotation not available (260 aa)
           
  0.914
PP1S246_119V6.1
Predicted protein (990 aa)
     
 
  0.836
PP1S59_349V6.1
annotation not available (509 aa)
     
 
  0.806
PP1S239_23V6.2
Predicted protein (389 aa)
           
  0.780
PP1S316_12V6.1
annotation not available (681 aa)
           
  0.768
PP1S54_161V6.1
Predicted protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family (517 aa)
           
  0.754
PP1S37_117V6.1
Predicted protein (599 aa)
     
   
  0.748
PP1S59_66V6.1
annotation not available (867 aa)
     
 
  0.726
PP1S30_295V6.1
annotation not available (862 aa)
     
 
  0.726
PP1S74_84V6.1
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit; Belongs to the WD repeat TRM82 family (434 aa)
           
  0.723
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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