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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S219_79V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S219_79V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S219_79V6.1annotation not available (728 aa)    
Predicted Functional Partners:
PP1S32_278V6.1
Predicted protein (482 aa)
   
   
  0.948
PP1S210_40V6.1
Predicted protein (475 aa)
   
   
  0.948
PP1S290_42V6.1
Predicted protein (598 aa)
   
   
  0.901
PP1S225_73V6.1
Predicted protein (601 aa)
   
   
  0.901
PP1S250_25V6.1
Predicted protein (760 aa)
     
 
  0.894
PP1S83_45V6.1
Predicted protein (827 aa)
     
 
  0.891
PP1S199_32V6.1
annotation not available (366 aa)
     
 
  0.891
PpSig5
Plastid sigma factor SIG5 (632 aa)
   
   
  0.889
PP1S30_41V6.1
Uncharacterized protein (501 aa)
     
        0.885
PP1S229_36V6.1
Predicted protein (1011 aa)
     
        0.885
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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