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PP1S21_259V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S21_259V6.1" - Peptidyl-prolyl cis-trans isomerase in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S21_259V6.1Peptidyl-prolyl cis-trans isomerase (112 aa)    
Predicted Functional Partners:
PP1S364_48V6.1
Peptidylprolyl isomerase (407 aa)
     
 
  0.999
PP1S448_6V6.1
Serine/threonine-protein kinase TOR (2522 aa)
       
 
  0.960
PP1S32_24V6.1
Peptidyl-prolyl cis-trans isomerase (119 aa)
     
 
  0.956
PP1S241_58V6.1
Peptidyl-prolyl cis-trans isomerase (119 aa)
     
 
  0.956
PP1S179_1V6.1
Predicted protein (342 aa)
       
 
  0.952
PP1S78_227V6.1
annotation not available (668 aa)
       
 
  0.940
PP1S78_226V6.1
annotation not available (3357 aa)
       
 
  0.940
PP1S51_182V6.1
annotation not available (398 aa)
       
 
  0.940
PP1S51_180V6.1
annotation not available (3325 aa)
       
 
  0.940
PP1S4335_1V6.1
Aspartokinase ; Belongs to the aspartokinase family (217 aa)
       
 
  0.924
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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