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SDG1510 protein (Physcomitrella patens) - STRING interaction network
"SDG1510" - Histone-lysine N-methyltransferase in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG1510Histone-lysine N-methyltransferase (2484 aa)    
Predicted Functional Partners:
HMTA1501
Histone H3 methyltransferase complex, subunit CPS60/ASH2/BRE2 (638 aa)
     
  0.981
PP1S10_107V6.1
Annotation not available (338 aa)
     
  0.981
SWDA1501
WD40 repeat protein, COMPASS complex protein (310 aa)
     
  0.980
PP1S70_188V6.1
Annotation not available (407 aa)
     
  0.980
PP1S143_120V6.1
Predicted protein (154 aa)
     
  0.980
PP1S99_260V6.1
Predicted protein (1158 aa)
     
  0.970
PP1S58_234V6.1
Annotation not available (878 aa)
     
  0.970
SWDC1502
WD40 repeat protein, COMPASS complex protein (309 aa)
     
  0.970
PP1S45_33V6.1
Annotation not available (412 aa)
     
  0.970
PP1S371_13V6.1
Annotation not available (71 aa)
     
  0.970
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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