STRINGSTRING
PP1S21_400V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S21_400V6.1" - Annotation not available in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S21_400V6.1Annotation not available (1225 aa)    
Predicted Functional Partners:
PP1S77_262V6.1
Predicted protein (2787 aa)
     
 
  0.958
PP1S46_194V6.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (263 aa)
   
 
  0.957
PP1S227_112V6.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (224 aa)
   
 
  0.957
PP1S93_66V6.1
Annotation not available (890 aa)
   
 
  0.956
PP1S243_58V6.1
Predicted protein (1315 aa)
   
 
  0.956
PP1S232_56V6.1
Annotation not available (1230 aa)
   
 
  0.956
PP1S222_3V6.1
Annotation not available (857 aa)
   
 
  0.956
PP1S152_88V6.1
Predicted protein (1174 aa)
   
 
  0.956
PP1S128_34V6.1
Annotation not available (871 aa)
   
 
  0.956
PP1S98_157V6.2
RecA (435 aa)
   
 
  0.953
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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