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STRINGSTRING
PP1S221_76V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S221_76V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S221_76V6.1Predicted protein (490 aa)    
Predicted Functional Partners:
PP1S83_246V6.1
Predicted protein (155 aa)
     
   
  0.953
PP1S78_205V6.1
Predicted protein (166 aa)
     
   
  0.953
PP1S31_66V6.2
Predicted protein (125 aa)
     
   
  0.949
PP1S307_12V6.1
Predicted protein (124 aa)
     
   
  0.949
PP1S249_53V6.1
Predicted protein (126 aa)
     
   
  0.949
PP1S116_110V6.1
Predicted protein (122 aa)
     
   
  0.949
PP1S74_135V6.1
Predicted protein (132 aa)
     
   
  0.947
PP1S5_396V6.1
Predicted protein (119 aa)
     
   
  0.947
PP1S5_384V6.1
Predicted protein (131 aa)
     
   
  0.947
PP1S3_520V6.1
Plastocyanin; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I (166 aa)
     
   
  0.947
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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