STRINGSTRING
PP1S222_41V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S222_41V6.1" - Predicted protein in Physcomitrella patens
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S222_41V6.1Predicted protein (1022 aa)    
Predicted Functional Partners:
PP1S16_395V6.1
Annotation not available (276 aa)
     
  0.994
PP1S251_77V6.1
Predicted protein; Component of the post-replicative DNA mismatch repair system (MMR) (951 aa)
     
0.992
PP1S474_7V6.1
Predicted protein (918 aa)
   
  0.989
PP1S58_199V6.1
Predicted protein (723 aa)
   
  0.989
PP1S5_400V6.1
Annotation not available (1030 aa)
   
  0.984
PP1S46_194V6.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (263 aa)
     
  0.984
PP1S227_112V6.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (224 aa)
     
  0.984
PP1S3_424V6.1
Annotation not available (153 aa)
     
 
  0.946
PP1S133_35V6.1
DNA polymerase (2249 aa)
     
 
  0.946
PP1S257_37V6.1
DNA polymerase (1555 aa)
     
 
  0.937
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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