STRINGSTRING
PP1S222_6V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S222_6V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S222_6V6.1Predicted protein (1050 aa)    
Predicted Functional Partners:
PP1S7_102V6.1
Predicted protein; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1712 aa)
     
  0.979
PP1S452_30V6.1
Clathrin heavy chain ; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1749 aa)
     
  0.979
PP1S270_53V6.1
Predicted protein; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1693 aa)
     
  0.979
PP1S147_10V6.1
Predicted protein; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1709 aa)
     
  0.979
PP1S97_279V6.1
Predicted protein (649 aa)
       
  0.978
PP1S97_232V6.1
Predicted protein (1661 aa)
       
  0.978
PP1S91_109V6.1
Predicted protein (652 aa)
       
  0.978
PP1S7_71V6.1
Predicted protein (629 aa)
       
  0.978
PP1S526_2V6.1
Predicted protein (648 aa)
       
  0.978
PP1S496_9V6.1
Predicted protein (581 aa)
       
  0.978
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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