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STRINGSTRING
PP1S222_99V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S222_99V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S222_99V6.1Predicted protein (434 aa)    
Predicted Functional Partners:
PP1S71_187V6.1
Cysteine synthase ; Belongs to the cysteine synthase/cystathionine beta- synthase family (396 aa)
 
  0.966
PP1S17_59V6.1
Cysteine synthase ; Belongs to the cysteine synthase/cystathionine beta- synthase family (395 aa)
 
  0.966
PP1S105_118V6.1
Cysteine synthase ; Belongs to the cysteine synthase/cystathionine beta- synthase family (314 aa)
 
  0.904
PP1S114_148V6.2
Predicted protein (306 aa)
       
  0.901
PP1S178_144V6.1
Predicted protein (354 aa)
     
 
  0.823
PP1S370_61V6.1
Threonine dehydratase (670 aa)
     
 
  0.819
PP1S186_44V6.1
annotation not available (554 aa)
 
  0.819
PP1S169_130V6.3
Predicted protein (405 aa)
         
  0.807
PP1S48_37V6.2
Predicted protein (517 aa)
         
  0.723
PP1S317_8V6.1
annotation not available (907 aa)
           
  0.700
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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