STRINGSTRING
PP1S223_40V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S223_40V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S223_40V6.1Predicted protein (498 aa)    
Predicted Functional Partners:
PP1S39_351V6.1
Annotation not available (870 aa)
         
  0.904
PP1S2_272V6.1
Predicted protein (895 aa)
         
  0.904
PP1S93_117V6.1
Predicted protein (513 aa)
   
   
0.903
PP1S45_270V6.1
Predicted protein (519 aa)
   
   
0.903
PP1S282_70V6.1
Predicted protein (509 aa)
   
   
0.903
PP1S94_26V6.1
Phospholipase D ; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond (810 aa)
         
  0.903
PP1S8_170V6.1
Phospholipase D ; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond (834 aa)
         
  0.903
PP1S58_143V6.1
Phospholipase D; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond (804 aa)
         
  0.903
PP1S462_5V6.1
Predicted protein (1180 aa)
         
  0.903
PP1S36_339V6.1
Phospholipase D; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond (934 aa)
         
  0.903
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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