STRINGSTRING
PP1S223_42V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S223_42V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S223_42V6.1Predicted protein (259 aa)    
Predicted Functional Partners:
PP1S34_360V6.1
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (632 aa)
   
 
  0.984
PP1S85_84V6.1
Predicted protein (360 aa)
   
    0.982
PP1S425_16V6.2
Predicted protein (368 aa)
   
    0.982
PP1S40_148V6.1
Thymidine kinase (285 aa)
     
 
  0.969
NDPK4
NDPK4 nucleotide diphosphate kinase-like protein (175 aa)
   
 
  0.959
NDPK6
NDPK6 nucleotide diphosphate kinase-like protein (183 aa)
   
 
  0.959
NDPK2b
Nucleoside diphosphate kinase (219 aa)
   
 
  0.959
NDPK2a
Nucleoside diphosphate kinase (216 aa)
   
 
  0.959
NDPK3a
Nucleoside diphosphate kinase (233 aa)
   
 
  0.959
NDPK5
NDPK5 nucleotide diphosphate kinase-like protein (393 aa)
   
 
  0.959
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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