STRINGSTRING
PP1S224_37V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S224_37V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S224_37V6.1Predicted protein (401 aa)    
Predicted Functional Partners:
PP1S114_86V6.1
Predicted protein (741 aa)
     
   
  0.615
PP1S135_115V6.1
Predicted protein (1034 aa)
       
    0.578
PP1S189_64V6.1
Predicted protein (449 aa)
   
   
  0.578
PP1S14_35V6.1
Predicted protein (305 aa)
   
   
  0.578
PP1S144_115V6.1
Predicted protein (356 aa)
   
   
  0.578
PP1S248_83V6.1
Annotation not available (122 aa)
   
   
  0.554
PP1S183_117V6.1
Predicted protein (383 aa)
           
  0.516
PP1S106_148V6.1
Predicted protein (422 aa)
       
    0.495
PP1S20_22V6.1
Predicted protein (272 aa)
           
  0.483
PP1S281_19V6.1
Predicted protein (389 aa)
           
  0.456
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
Server load: low (16%) [HD]