STRINGSTRING
PP1S224_51V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S224_51V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S224_51V6.1Predicted protein (172 aa)    
Predicted Functional Partners:
PP1S88_62V6.1
Predicted protein (930 aa)
     
 
  0.898
PP1S194_198V6.1
Predicted protein (924 aa)
     
 
  0.898
PP1S169_77V6.1
Annotation not available (652 aa)
     
 
  0.898
PP1S18_81V6.1
Predicted protein (920 aa)
     
      0.741
PP1S64_202V6.1
Annotation not available (223 aa)
   
   
  0.713
PP1S106_134V6.1
Predicted protein (329 aa)
     
      0.711
PP1S82_98V6.2
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (249 aa)
     
 
  0.709
PP1S196_68V6.1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (247 aa)
     
 
  0.709
PP1S133_102V6.1
Annotation not available (245 aa)
     
 
  0.709
PP1S35_207V6.1
Predicted protein (267 aa)
     
 
  0.695
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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