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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S226_20V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S226_20V6.2" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S226_20V6.2annotation not available (1814 aa)    
Predicted Functional Partners:
PP1S240_31V6.1
Predicted protein (193 aa)
     
 
  0.870
PP1S17_11V6.1
annotation not available (447 aa)
       
 
  0.821
PP1S59_348V6.1
annotation not available (1048 aa)
       
 
  0.808
PP1S114_52V6.1
annotation not available (302 aa)
   
 
  0.803
PP1S101_153V6.1
DNA-(apurinic or apyrimidinic site) lyase (373 aa)
   
 
  0.803
PP1S357_53V6.1
Predicted protein (285 aa)
     
 
  0.738
PP1S16_385V6.2
Putative pantoate-beta-alanine ligase (312 aa)
         
  0.684
PP1S80_34V6.1
annotation not available (847 aa)
     
 
  0.677
PP1S199_89V6.1
annotation not available (1133 aa)
     
 
  0.654
PP1S3_417V6.1
annotation not available (1860 aa)
   
 
  0.652
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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