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STRINGSTRING
PP1S227_127V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S227_127V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S227_127V6.1Predicted protein (164 aa)    
Predicted Functional Partners:
PP1S318_13V6.2
Predicted protein (435 aa)
   
   
  0.870
PP1S199_143V6.1
Predicted protein (437 aa)
   
   
  0.870
PP1S34_87V6.1
Predicted protein; Belongs to the heat shock protein 70 family (780 aa)
   
 
  0.667
PP1S71_136V6.1
Predicted protein (423 aa)
   
   
  0.633
PP1S91_109V6.1
Predicted protein; Belongs to the heat shock protein 70 family (652 aa)
   
 
  0.619
PP1S298_26V6.1
Predicted protein; Belongs to the heat shock protein 70 family (649 aa)
   
 
  0.619
PP1S160_132V6.1
Predicted protein (229 aa)
     
 
  0.604
PP1S145_153V6.1
annotation not available (139 aa)
     
 
  0.604
PP1S241_31V6.1
Predicted protein (697 aa)
     
 
  0.590
PP1S157_85V6.1
Predicted protein (112 aa)
   
 
  0.574
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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