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STRINGSTRING
PP1S227_9V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S227_9V6.1" - Pectinesterase in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S227_9V6.1Pectinesterase (379 aa)    
Predicted Functional Partners:
PP1S140_26V6.1
Predicted protein (480 aa)
           
  0.778
PP1S162_62V6.1
Predicted protein (70 aa)
           
  0.776
PP1S409_14V6.1
Predicted protein (96 aa)
           
  0.612
PP1S54_260V6.1
Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane (789 aa)
           
  0.591
PP1S144_100V6.1
Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane (791 aa)
           
  0.591
PP1S21_222V6.1
Predicted protein (174 aa)
           
  0.583
PP1S80_181V6.1
annotation not available (927 aa)
           
  0.531
PP1S80_146V6.1
annotation not available (252 aa)
           
  0.531
PP1S63_200V6.1
annotation not available (891 aa)
           
  0.531
PP1S31_198V6.1
annotation not available (922 aa)
           
  0.531
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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