• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S228_12V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S228_12V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S228_12V6.1annotation not available (191 aa)    
Predicted Functional Partners:
PP1S37_240V6.1
Predicted protein (128 aa)
   
 
  0.959
PP1S25_110V6.2
Predicted protein (128 aa)
   
 
  0.959
PP1S159_143V6.1
Predicted protein (126 aa)
   
 
  0.959
PP1S244_85V6.1
annotation not available (350 aa)
   
   
  0.953
PP1S199_129V6.1
Predicted protein (435 aa)
   
   
  0.953
PP1S199_130V6.2
Predicted protein (445 aa)
   
   
  0.953
PP1S258_44V6.2
Predicted protein (447 aa)
   
   
  0.953
PP1S86_156V6.1
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family (406 aa)
   
 
  0.953
PP1S264_71V6.1
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family (406 aa)
   
 
  0.953
PP1S264_65V6.1
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family (472 aa)
   
 
  0.953
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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