STRINGSTRING
PP1S229_38V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S229_38V6.1" - Predicted protein in Physcomitrella patens
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S229_38V6.1Predicted protein (927 aa)    
Predicted Functional Partners:
PP1S62_215V6.1
Annotation not available (1149 aa)
     
 
  0.973
PP1S130_78V6.2
Predicted protein (450 aa)
     
 
  0.967
PP1S128_112V6.1
Predicted protein (168 aa)
       
 
  0.966
PP1S203_89V6.1
Annotation not available (157 aa)
     
 
  0.940
PP1S203_88V6.1
Predicted protein (222 aa)
     
 
  0.940
PP1S104_112V6.1
Annotation not available (948 aa)
     
 
  0.940
PP1S250_15V6.1
Predicted protein (142 aa)
       
 
  0.938
PP1S220_70V6.1
Predicted protein (142 aa)
       
 
  0.938
PP1S43_137V6.1
Predicted protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules (900 aa)
     
 
  0.927
PP1S338_11V6.1
Predicted protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules (899 aa)
     
 
  0.927
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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