STRINGSTRING
PP1S229_47V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S229_47V6.2" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S229_47V6.2annotation not available (450 aa)    
Predicted Functional Partners:
PP1S13_215V6.1
Predicted protein (434 aa)
     
   
  0.916
PP1S1_150V6.1
annotation not available (365 aa)
     
   
  0.801
PP1S157_58V6.1
Predicted protein (488 aa)
     
   
  0.801
PP1S13_24V6.1
Predicted protein (455 aa)
     
   
  0.801
PP1S276_65V6.1
Predicted protein (1322 aa)
     
   
  0.790
PP1S62_19V6.1
annotation not available (620 aa)
     
   
  0.777
PP1S233_14V6.1
Inner dynein arm light chain (245 aa)
     
   
  0.730
PP1S201_93V6.1
annotation not available (1642 aa)
     
   
  0.656
PP1S52_148V6.1
Predicted protein (425 aa)
     
   
  0.610
PP1S42_283V6.1
Flagellar radial spoke protein 3 (422 aa)
     
   
  0.610
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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