STRINGSTRING
PP1S22_270V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S22_270V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S22_270V6.1Predicted protein (109 aa)    
Predicted Functional Partners:
PP1S357_53V6.1
Predicted protein (285 aa)
     
  0.990
PP1S257_1V6.1
Predicted protein (479 aa)
     
  0.984
PP1S222_133V6.1
Annotation not available (863 aa)
     
  0.975
PP1S192_40V6.1
Annotation not available (885 aa)
     
  0.975
PP1S309_26V6.1
Predicted protein (137 aa)
         
    0.800
PP1S168_44V6.1
Predicted protein (138 aa)
         
    0.800
PP1S3_417V6.1
Predicted protein (1860 aa)
       
      0.757
PP1S225_68V6.1
Predicted protein (992 aa)
     
 
  0.670
PP1S121_27V6.1
Predicted protein; Single-stranded DNA-dependent ATP-dependent helicase (681 aa)
       
      0.667
PP1S299_4V6.1
Predicted protein (611 aa)
       
      0.654
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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