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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S232_50V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S232_50V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S232_50V6.1annotation not available (389 aa)    
Predicted Functional Partners:
PP1S245_93V6.1
annotation not available (977 aa)
     
      0.817
PP1S234_65V6.1
Predicted protein (437 aa)
       
 
  0.808
PP1S201_7V6.2
Predicted protein (275 aa)
       
      0.704
PP1S427_10V6.1
Predicted protein (717 aa)
     
      0.631
PP1S18_273V6.1
Predicted protein (715 aa)
     
      0.631
PP1S18_265V6.1
Predicted protein (715 aa)
     
      0.631
PP1S112_133V6.1
Predicted protein (213 aa)
       
      0.627
PP1S67_59V6.1
Predicted protein; Belongs to the thiolase family (460 aa)
       
      0.626
PP1S55_275V6.1
Predicted protein; Belongs to the thiolase family (460 aa)
       
      0.626
PP1S56_221V6.1
Predicted protein (428 aa)
       
      0.623
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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