STRINGSTRING
PP1S232_52V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S232_52V6.1" - Annotation not available in Physcomitrella patens
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S232_52V6.1Annotation not available (587 aa)    
Predicted Functional Partners:
PP1S532_6V6.1
Predicted protein (348 aa)
       
 
  0.485
PP1S370_67V6.1
Annotation not available (174 aa)
       
 
  0.485
ppabcb3
ATP-binding cassette transporter, subfamily B, member 4, group TAP protein PpABCB4 (900 aa)
     
   
  0.423
PP1S73_202V6.1
ATP-binding cassette transporter, subfamily B, member 3, group TAP protein PpABCB3 (860 aa)
     
   
  0.423
ppabcb6
ATP-binding cassette transporter, subfamily B, member 6, group TAP protein PpABCB6 (768 aa)
     
   
  0.423
ppabcb5
ATP-binding cassette transporter, subfamily B, member 5, group TAP protein PpABCB5 (769 aa)
     
   
  0.423
ppabcb7
ATP-binding cassette transporter, subfamily B, member 7, group TAP protein PpABCB7 (708 aa)
     
   
  0.423
ppabcb1
ATP-binding cassette transporter, subfamily B, member 1, group LLP protein PpABCB1 (690 aa)
     
   
  0.423
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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