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PP1S233_13V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S233_13V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S233_13V6.1Predicted protein (368 aa)    
Predicted Functional Partners:
PP1S26_115V6.1
Predicted protein (368 aa)
     
 
  0.995
PP1S89_83V6.1
annotation not available (400 aa)
     
 
  0.993
PP1S169_131V6.1
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1200 aa)
     
      0.894
PP1S17_285V6.1
Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) (479 aa)
     
      0.894
PP1S17_278V6.1
Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) (481 aa)
     
      0.894
PP1S46_317V6.2
Predicted protein (490 aa)
     
      0.893
PP1S55_319V6.1
Predicted protein (336 aa)
     
        0.885
PP1S53_169V6.1
Predicted protein (312 aa)
     
        0.885
PP1S352_15V6.1
Predicted protein (328 aa)
     
        0.885
PP1S30_137V6.1
Uncharacterized protein (804 aa)
     
        0.885
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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