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STRINGSTRING
PP1S235_137V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S235_137V6.1" - Calcium load-activated calcium channel in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S235_137V6.1Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling (189 aa)    
Predicted Functional Partners:
PP1S3_192V6.1
Predicted protein (179 aa)
     
        0.885
PP1S249_66V6.1
Predicted protein (152 aa)
     
        0.883
PP1S129_87V6.1
Predicted protein (272 aa)
       
      0.845
PP1S102_12V6.1
Predicted protein (300 aa)
       
      0.845
PP1S7_125V6.1
Uncharacterized protein (139 aa)
           
  0.837
PP1S28_127V6.1
Uncharacterized protein (141 aa)
           
  0.837
PP1S80_58V6.1
annotation not available (264 aa)
       
      0.830
PP1S61_228V6.1
Predicted protein (321 aa)
       
      0.830
PP1S61_215V6.1
Predicted protein (321 aa)
       
      0.830
PP1S2_788V6.1
Predicted protein (322 aa)
       
      0.830
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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