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PP1S235_138V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S235_138V6.1" - L-lactate dehydrogenase in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S235_138V6.1L-lactate dehydrogenase (367 aa)    
Predicted Functional Partners:
PP1S46_63V6.1
Predicted protein (610 aa)
   
  0.992
PP1S35_384V6.1
Predicted protein (610 aa)
   
  0.992
PP1S38_44V6.1
Malic enzyme (592 aa)
   
  0.982
PP1S332_33V6.1
Malic enzyme (629 aa)
   
  0.982
PP1S2_734V6.2
Malic enzyme (594 aa)
   
  0.982
PP1S1_539V6.1
Malic enzyme (670 aa)
   
  0.982
PP1S90_85V6.1
Pyruvate kinase (525 aa)
   
  0.979
PP1S90_133V6.1
Pyruvate kinase (526 aa)
   
  0.979
PP1S70_15V6.1
Pyruvate kinase (619 aa)
   
  0.979
PP1S449_9V6.1
Pyruvate kinase (601 aa)
   
  0.979
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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