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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S235_92V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S235_92V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S235_92V6.1annotation not available (799 aa)    
Predicted Functional Partners:
PP1S88_186V6.1
Predicted protein (1189 aa)
   
 
  0.789
PP1S81_123V6.1
Predicted protein (1194 aa)
   
 
  0.789
PP1S69_82V6.1
Predicted protein (776 aa)
     
      0.768
PP1S59_88V6.1
Uncharacterized protein; Belongs to the protein kinase superfamily (358 aa)
     
      0.768
PP1S36_202V6.1
annotation not available (66 aa)
     
      0.768
PP1S36_201V6.1
annotation not available (227 aa)
     
      0.768
PP1S385_43V6.1
Predicted protein; Belongs to the FBPase class 1 family (339 aa)
     
   
  0.609
PP1S1_300V6.1
Uncharacterized protein; Belongs to the FBPase class 1 family (339 aa)
     
   
  0.609
PP1S9_141V6.1
annotation not available (1040 aa)
     
        0.604
PP1S175_129V6.1
Predicted protein (423 aa)
         
  0.601
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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