• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S236_9V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S236_9V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S236_9V6.1annotation not available (270 aa)    
Predicted Functional Partners:
PP1S6_43V6.1
Predicted protein; Belongs to the peptidase A1 family (525 aa)
           
  0.744
PP1S90_35V6.1
annotation not available (157 aa)
           
  0.561
PP1S22_40V6.1
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family (757 aa)
     
   
  0.539
PP1S55_148V6.1
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors; Belongs to the peptidase A22A family (477 aa)
       
 
  0.539
PP1S1362_2V6.1
Predicted protein (305 aa)
     
 
  0.533
PP1S230_38V6.1
annotation not available (717 aa)
     
        0.532
PP1S125_1V6.1
annotation not available (712 aa)
     
        0.532
GH3-1
Predicted protein (636 aa)
           
  0.529
PP1S62_113V6.1
annotation not available (377 aa)
           
  0.525
PP1S99_158V6.1
Predicted protein; Belongs to the peptidase A1 family (455 aa)
           
  0.517
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (11%) [HD]