STRINGSTRING
PP1S238_34V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S238_34V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S238_34V6.1Predicted protein (1086 aa)    
Predicted Functional Partners:
PP1S88_199V6.1
Predicted protein (1369 aa)
     
 
  0.805
PP1S26_271V6.1
Predicted protein (1400 aa)
     
 
  0.805
PP1S199_73V6.2
Annotation not available (1405 aa)
     
 
  0.805
PP1S124_156V6.1
Predicted protein (1400 aa)
     
 
  0.805
PP1S41_292V6.1
Predicted protein (956 aa)
     
   
  0.550
PP1S14_277V6.1
Predicted protein (973 aa)
     
   
  0.550
PP1S93_76V6.1
Annotation not available (2027 aa)
       
 
  0.504
PP1S162_71V6.1
Annotation not available (1690 aa)
       
 
  0.504
PP1S91_195V6.1
Predicted protein; Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms (238 aa)
           
  0.472
PP1S54_244V6.1
Predicted protein; Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms (322 aa)
           
  0.472
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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