STRINGSTRING
PP1S238_51V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S238_51V6.1" - Annotation not available in Physcomitrella patens
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S238_51V6.1Annotation not available (109 aa)    
Predicted Functional Partners:
PP1S35_271V6.1
Predicted protein; Acts as subunit of the RNA polymerase II elongator complex, which is a histone acetyltransferase component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation (1335 aa)
     
  0.982
RUVBL1502
Predicted protein (1320 aa)
     
  0.981
HAG1502
RNA polymerase II elongator complex, subunit ELP3/histone acetyltransferase (569 aa)
     
  0.977
PP1S167_46V6.1
Annotation not available (552 aa)
     
  0.977
PP1S371_9V6.1
Annotation not available (279 aa)
     
  0.929
PP1S190_89V6.1
Predicted protein (943 aa)
       
      0.919
PP1S40_204V6.1
Predicted protein (139 aa)
       
      0.917
PP1S32_141V6.1
Predicted protein (138 aa)
       
      0.917
PP1S519_2V6.1
Predicted protein (178 aa)
     
      0.900
GTF1502.1
TATA-box binding protein, component of TFIID and TFIIIB (211 aa)
       
      0.873
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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