• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S239_40V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S239_40V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S239_40V6.1Predicted protein; Belongs to the ATCase/OTCase family (401 aa)    
Predicted Functional Partners:
PP1S355_13V6.1
Predicted protein (483 aa)
   
  0.997
PP1S52_50V6.1
Predicted protein (392 aa)
     
 
  0.992
PP1S246_62V6.1
annotation not available (407 aa)
   
 
  0.972
PP1S42_59V6.2
Predicted protein (468 aa)
 
 
 
  0.970
PP1S11_3V6.1
Predicted protein (467 aa)
 
 
 
  0.970
PP1S343_21V6.1
Predicted protein (1239 aa)
 
 
 
  0.967
PP1S43_32V6.1
Predicted protein (1238 aa)
 
 
 
  0.967
PP1S25_361V6.1
Predicted protein (476 aa)
   
   
  0.966
PP1S142_119V6.1
annotation not available (445 aa)
   
   
  0.966
PURA1
Adenylosuccinate synthetase 1, chloroplastic; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP (By similarity); Belongs to the adenylosuccinate synthetase family (514 aa)
   
 
  0.962
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (8%) [HD]