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STRINGSTRING
PP1S23_318V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S23_318V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S23_318V6.1Predicted protein (419 aa)    
Predicted Functional Partners:
PP1S51_160V6.2
Predicted protein (346 aa)
     
        0.567
PP1S47_62V6.1
Predicted protein (325 aa)
     
        0.567
PP1S47_50V6.1
Predicted protein (325 aa)
     
        0.567
PP1S60_185V6.1
Predicted protein (446 aa)
          0.551
PP1S294_11V6.1
Predicted protein (483 aa)
 
          0.526
PP1S252_60V6.1
Predicted protein (477 aa)
          0.526
PP1S20_252V6.2
Predicted protein (482 aa)
          0.526
PP1S194_34V6.1
Predicted protein (451 aa)
 
          0.526
PP1S18_221V6.1
Predicted protein (481 aa)
 
          0.525
PP1S17_289V6.1
Predicted protein (452 aa)
 
          0.522
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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