STRINGSTRING
PP1S240_78V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S240_78V6.1" - Annotation not available in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S240_78V6.1Annotation not available (615 aa)    
Predicted Functional Partners:
Mcb1
Predicted protein (414 aa)
     
  0.964
PP1S229_18V6.1
Predicted protein (401 aa)
     
  0.961
PP1S3_23V6.1
Proteasome subunit beta type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (227 aa)
     
  0.961
PP1S66_117V6.1
Predicted protein (386 aa)
     
  0.959
PP1S131_74V6.1
Predicted protein (386 aa)
     
  0.959
PP1S68_29V6.1
Predicted protein (267 aa)
     
  0.958
PP1S48_71V6.1
Predicted protein (267 aa)
     
  0.958
PP1S70_168V6.1
Predicted protein (386 aa)
     
  0.958
PP1S58_47V6.1
Predicted protein (386 aa)
     
  0.958
PP1S160_63V6.1
Annotation not available (186 aa)
     
  0.958
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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