STRINGSTRING
PP1S241_112V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S241_112V6.2" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S241_112V6.2Predicted protein (485 aa)    
Predicted Functional Partners:
PP1S46_56V6.1
Protein disulfide isomerase-like PDI-L (485 aa)
           
  0.526
PP1S77_54V6.2
Predicted protein (567 aa)
           
  0.479
PP1S55_265V6.1
Predicted protein (440 aa)
           
  0.479
PP1S4_328V6.1
Predicted protein (603 aa)
           
  0.479
PP1S433_7V6.1
Annotation not available (159 aa)
           
  0.479
PP1S210_97V6.1
Annotation not available (561 aa)
           
  0.479
PP1S13_415V6.1
Annotation not available (435 aa)
           
  0.479
PP1S122_5V6.1
Annotation not available (573 aa)
           
  0.479
PP1S37_209V6.1
Predicted protein (893 aa)
           
  0.475
PP1S317_77V6.1
Predicted protein (912 aa)
           
  0.475
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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