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STRINGSTRING
PP1S241_28V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S241_28V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S241_28V6.1Predicted protein (534 aa)    
Predicted Functional Partners:
PP1S70_202V6.1
Predicted protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family (374 aa)
         
  0.717
PP1S3842_2V6.1
Predicted protein (415 aa)
           
  0.634
PP1S262_68V6.1
annotation not available (82 aa)
       
 
  0.629
PP1S97_105V6.1
annotation not available (624 aa)
       
 
  0.475
PP1S54_159V6.1
Predicted protein; Belongs to the protein kinase superfamily (663 aa)
       
 
  0.475
PP1S41_280V6.1
annotation not available (648 aa)
       
 
  0.475
PP1S364_10V6.1
Predicted protein (639 aa)
       
 
  0.475
PP1S61_97V6.1
Predicted protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family (319 aa)
         
  0.426
PP1S61_105V6.1
annotation not available (83 aa)
         
  0.426
PP1S2_610V6.2
Predicted protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family (328 aa)
         
  0.426
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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