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STRINGSTRING
PP1S241_58V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S241_58V6.1" - Peptidyl-prolyl cis-trans isomerase in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S241_58V6.1Peptidyl-prolyl cis-trans isomerase (119 aa)    
Predicted Functional Partners:
PP1S21_259V6.1
Peptidyl-prolyl cis-trans isomerase (112 aa)
     
 
  0.956
PP1S258_47V6.1
Predicted protein (109 aa)
     
        0.857
PP1S104_99V6.2
Predicted protein (751 aa)
     
      0.847
PP1S36_35V6.1
Predicted protein (493 aa)
     
      0.847
PP1S21_222V6.1
Predicted protein (174 aa)
     
 
  0.845
GTA1501
RNA polymerase II transcription elongation factor SPT5 (1070 aa)
     
 
  0.826
PP1S144_35V6.1
annotation not available (1060 aa)
     
 
  0.826
PP1S6_186V6.1
Predicted protein (127 aa)
     
        0.787
PP1S58_147V6.1
annotation not available (1356 aa)
     
 
  0.786
PP1S26_173V6.1
Predicted protein (566 aa)
     
 
  0.782
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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